Publications

Selected Publications

Full list of publications can be found by clicking this link to Pubmed

  • Virk, SM, Trujillo-Provencio, C, Serrano, EE. (2024). Transcriptomic Analysis Identifies Candidate Genes for Differential Expression during Xenopus laevis Inner Ear Development. bioRxiv, 2023.12.29.573599. https://doi.org/10.1101/2023.12.29.573599.

  • Ostrom QT, Gittleman H, Stetson L, Virk S, Barnholtz-Sloan JS. Epidemiology of Intracranial Gliomas. Prog Neurol Surg. 2018;30:1-11. doi: 10.1159/000464374. Epub 2017 Dec 14.

  • Peng S, Dhruv H, Armstrong B, Salhia B, Legendre C, Kiefer J, Parks J, Virk S, Sloan AE, Ostrom QT, Barnholtz-Sloan JS, Tran NL, Berens ME. Integrated genomic analysis of survival outliers in glioblastoma. Neuro Oncol. 2016 Dec 8. pii: now269.

  • Virk SM, Gibson RM, Quinones-Mateu ME, Barnholtz-Sloan JS. Identification of Variants in Primary and Recurrent Glioblastoma using a Cancer-specific Gene Panel and Whole Exome Sequencing. PLoS One. 2015 May 7;10(5):e0124178. doi: 10.1371/journal.pone.0124178. eCollection 2015.

  • Kim H, Zheng S, Amini SS, Virk SM, Mikkelsen T, Brat DJ, Grimsby J, Sougnez C, Muller F, Hu J, Sloan AE, Cohen ML, Van Meir EG, Scarpace L, Laird PW, Weinstein JN, Lander ES, Gabriel S, Getz G, Meyerson M, Chin L, Barnholtz-Sloan JS, Verhaak RG. Whole-genome and multisector exome sequencing of primary and post-treatment glioblastoma reveals patterns of tumor evolution. Genome Res. 2015 Mar;25(3):316-27.

  • Ostrom QT, Gittleman H, Stetson L, Virk SM, Barnholtz-Sloan JS (2015). Epidemiology of Gliomas. In J Raizer & A Parsa (Eds), Current Understanding and Treatment of Gliomas (pp.1-14). New York, NY: Springer.

  • Powers TR, Virk SM, Trujillo-Provencio C, and Serrano EE. Probing the Xenopus laevis inner ear transcriptome for biological function. BMC Genomics. 2012 Jun 8;13:225.

  • Powers TR, Virk SM, and Serrano EE. Strategies for enhanced annotation of a microarray probe set. Int J Bioinform Res Appl. 2010; 6(2):163-178.